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  5. AMTR_s00137p00039300

AMTR_s00137p00039300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00137.13

Description : Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.KNL2/Mis18 CENH3 recruitment factor


Gene families : OG0002725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00137p00039300

Target Alias Description ECC score Gene Family Method Actions
AT1G58210 EMB1674 kinase interacting family protein 0.02 OrthoFinder output from all 47 species
Als_g09064 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12068 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_19121 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g28040.1 LOC_Os04g28040 CENH3-recruitment factor (KNL2/Mis18) 0.04 OrthoFinder output from all 47 species
Lfl_g08207 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR015216 SANTA 17 108
No external refs found!