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  5. AMTR_s00132p00112670

AMTR_s00132p00112670 (ATRCCR, ACD2,...)


Aliases : ATRCCR, ACD2, evm_27.TU.AmTr_v1.0_scaffold00132.27

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.red chlorophyll catabolite reductase (RCCR)


Gene families : OG0004195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00132p00112670
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Adi_g009327 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Aev_g02924 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Aob_g06434 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Aop_g07820 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g14019 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.07 OrthoFinder output from all 47 species
Dac_g14729 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
LOC_Os10g25030.1 ATRCCR, ACD2,... red chlorophyll catabolite reductase (RCCR) 0.03 OrthoFinder output from all 47 species
Msp_g07054 ATRCCR, ACD2 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Sam_g09156 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Sam_g29636 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Zm00001e002817_P001 ATRCCR, ACD2,... red chlorophyll catabolite reductase (RCCR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009439 RCC_reductase 47 295
No external refs found!