1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00131p00113720

AMTR_s00131p00113720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.85

Description : Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.nucleoredoxin


Gene families : OG0001689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001689_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00113720
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT4G31240 No alias protein kinase C-like zinc finger protein 0.03 OrthoFinder output from all 47 species
Gb_30886 No alias nucleoredoxin 0.06 OrthoFinder output from all 47 species
LOC_Os01g58194.1 LOC_Os01g58194 nucleoredoxin 0.02 OrthoFinder output from all 47 species
LOC_Os03g29244.1 LOC_Os03g29244 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g24714 No alias EC_1.8 oxidoreductase acting on sulfur group of donor &... 0.02 OrthoFinder output from all 47 species
MA_10433815g0020 No alias nucleoredoxin 0.03 OrthoFinder output from all 47 species
MA_10433815g0030 No alias nucleoredoxin 0.04 OrthoFinder output from all 47 species
MA_808469g0010 No alias Probable nucleoredoxin 1-2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Sam_g35754 No alias EC_1.8 oxidoreductase acting on sulfur group of donor &... 0.02 OrthoFinder output from all 47 species
Solyc04g081900.4.1 Solyc04g081900 nucleoredoxin 0.04 OrthoFinder output from all 47 species
Solyc05g005470.4.1 Solyc05g005470 nucleoredoxin 0.02 OrthoFinder output from all 47 species
Zm00001e001941_P001 Zm00001e001941 nucleoredoxin 0.01 OrthoFinder output from all 47 species
Zm00001e028923_P002 Zm00001e028923 nucleoredoxin 0.03 OrthoFinder output from all 47 species
Zm00001e041607_P001 Zm00001e041607 nucleoredoxin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!