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  5. AMTR_s00131p00063460

AMTR_s00131p00063460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.37

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00063460
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 OrthoFinder output from all 47 species
AMTR_s00061p00096800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT2G06020 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.04 OrthoFinder output from all 47 species
AT2G40260 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G04605 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G45580 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g006433 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g025473 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g077902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g080178 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12016 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g12852 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g14535 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g17220 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g21257 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g04915 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15748 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01625 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aob_g07352 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g16136 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aob_g40224 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19889.t1 Aspi01Gene19889 transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21948.t1 Aspi01Gene21948 transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42025.t1 HRS1, Aspi01Gene42025 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65261.t1 Aspi01Gene65261 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g03918 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g20820 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g24159 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G062400.1 Ceric.12G062400 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.32G050900.1 Ceric.32G050900 transcription factor *(CLAUSA) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g08384 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g20781 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g27691 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g34786 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dcu_g03890 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04782 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07086 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26187 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g16600 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43193 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08285 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15807 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21970 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29468 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
GSVIVT01036717001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_08427 KAN, KAN1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_17469 KAN, KAN1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_27262 No alias G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Gb_36677 No alias G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g48596.1 LOC_Os07g48596 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Len_g21596 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g01284 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05331 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_1432g0010 No alias Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_201937g0010 APL, WDY G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_28188g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
MA_293791g0010 No alias Myb family transcription factor PHL7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_6619111g0010 KAN, KAN1 G2-like GARP transcription factor 0.07 OrthoFinder output from all 47 species
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp3g04970.1 KAN, KAN1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23759 No alias KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08018 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09161 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g29222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37615 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13488 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g26114 PHL1 transcription factor *(PHR1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04161 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g08186 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11923 KAN, KAN1 KANADI-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g13922 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17236 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g21082 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g28434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_8710V3.1 Pp3c23_8710 myb-like HTH transcriptional regulator family protein 0.05 OrthoFinder output from all 47 species
Ppi_g15588 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g41564 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g60520 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007778 No alias not classified & original description: CDS=1-762 0.05 OrthoFinder output from all 47 species
Sam_g15241 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g22183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40620 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo270428 PHR1, AtPHR1 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
Smo405704 KAN4, ATS RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Smo417629 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.04 OrthoFinder output from all 47 species
Solyc02g080740.3.1 Solyc02g080740 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
Solyc03g006150.2.1 Solyc03g006150 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc07g045000.4.1 Solyc07g045000 Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
Solyc08g005260.2.1 KAN2, Solyc08g005260 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Solyc10g078720.2.1 Solyc10g078720 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.04 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g47326 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g51907 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e013626_P001 Zm00001e013626 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e014339_P001 Zm00001e014339 Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e030689_P002 Zm00001e030689 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 264 315
IPR025756 Myb_CC_LHEQLE 356 400
No external refs found!