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  5. AMTR_s00131p00047750

AMTR_s00131p00047750 (JAZ12, TIFY3B,...)


Aliases : JAZ12, TIFY3B, evm_27.TU.AmTr_v1.0_scaffold00131.28

Description : RNA biosynthesis.transcriptional activation.TIFY transcription factor


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00047750
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Als_g52890 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G093100.1 JAZ9, TIFY7,... not classified & original description: pacid=50591928... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08330.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
LOC_Os03g28940.1 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
Mp6g06230.1 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Nbi_g13263 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28196 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46582 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53759 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035358_P001 JAZ12, TIFY3B,... Protein TIFY 3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e037230_P002 JAZ12, TIFY3B,... Protein TIFY 3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018467 CCT_CS 158 183
IPR010399 Tify_dom 74 105
No external refs found!