1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00131p00035560

AMTR_s00131p00035560 (CSY4, ATCS,...)


Aliases : CSY4, ATCS, evm_27.TU.AmTr_v1.0_scaffold00131.20

Description : Cellular respiration.tricarboxylic acid cycle.citrate synthase


Gene families : OG0001709 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001709_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00035560
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0093.g043350 CSY4, ATCS EC_2.3 acyltransferase & original description: CDS=122-1525 0.03 OrthoFinder output from all 47 species
Cba_g03215 CSY4, ATCS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03891 CSY4, ATCS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10611 CSY4, ATCS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06466 CSY4, ATCS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00842 CSY4, ATCS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044262 cellular carbohydrate metabolic process IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 86 463
No external refs found!