AMTR_s00131p00032340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.16

Description : CASP-like protein 2A1 OS=Oryza sativa subsp. japonica


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00032340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.07 OrthoFinder output from all 47 species
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115376 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g03545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18231.t1 Aspi01Gene18231 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18889.t1 Aspi01Gene18889 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18890.t1 Aspi01Gene18890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21004.t1 Aspi01Gene21004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33412.t1 Aspi01Gene33412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025274 No alias not classified & original description: CDS=467-1165 0.05 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.04 OrthoFinder output from all 47 species
Azfi_s0261.g060778 No alias not classified & original description: CDS=437-994 0.05 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.04 OrthoFinder output from all 47 species
Cba_g06338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08984 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.06 OrthoFinder output from all 47 species
Ceric.08G055900.1 Ceric.08G055900 not classified & original description: pacid=50637769... 0.04 OrthoFinder output from all 47 species
Ceric.23G007600.1 Ceric.23G007600 not classified & original description: pacid=50611535... 0.07 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.09 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45174 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g01295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010256001 No alias CASP-like protein 2A1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01029179001 No alias CASP-like protein 2C1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
Gb_02196 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10030.1 LOC_Os03g10030 CASP-like protein Os03g0196400 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.08 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g15691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28436 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.02 OrthoFinder output from all 47 species
Msp_g06626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014965 No alias not classified & original description: CDS=570-1202 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019924 No alias not classified & original description: CDS=83-670 0.03 OrthoFinder output from all 47 species
Sam_g02059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo272089 No alias CASP-like protein 2U6 OS=Selaginella moellendorffii 0.04 OrthoFinder output from all 47 species
Smo439258 No alias SCA7 domain-containing protein SELMODRAFT_439258... 0.03 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.08 OrthoFinder output from all 47 species
Solyc10g007660.3.1 Solyc10g007660 CASP-like protein 2A1 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g06771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040663_P001 Zm00001e040663 CASP-like protein 2A2 OS=Zea mays (sp|b6sr79|cspl7_maize : 271.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 34 173
No external refs found!