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  5. AMTR_s00130p00061410

AMTR_s00130p00061410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.28

Description : Protein STICHEL-like 3 OS=Arabidopsis thaliana


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00061410

Target Alias Description ECC score Gene Family Method Actions
AT2G02480 STI AAA-type ATPase family protein 0.03 OrthoFinder output from all 47 species
Ala_g27509 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01300.t1 STI, Aspi01Gene01300 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18920.t1 Aspi01Gene18920 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28417.t1 STI, Aspi01Gene28417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0189.g056837 STI not classified & original description: CDS=1-2454 0.03 OrthoFinder output from all 47 species
Ceric.27G034600.1 STI, Ceric.27G034600 not classified & original description: pacid=50605520... 0.03 OrthoFinder output from all 47 species
Ceric.29G056200.1 STI, Ceric.29G056200 not classified & original description: pacid=50625591... 0.03 OrthoFinder output from all 47 species
Dac_g09854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021264001 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os11g13990.1 STI, LOC_Os11g13990 Protein STICHEL OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g20046 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04286 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_15491g0010 STI Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010593 STI not classified & original description: CDS=440-3766 0.03 OrthoFinder output from all 47 species
Sam_g25287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 680 796
No external refs found!