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  5. AMTR_s00130p00039420

AMTR_s00130p00039420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.12

No description available


Gene families : OG0004823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00039420
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT3G56220 No alias transcription regulators 0.04 OrthoFinder output from all 47 species
Aev_g36751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08380 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g11944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14512 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g018500.3.1 Solyc09g018500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g02758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001597_P001 Zm00001e001597 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!