Zm00001d024751


Description : 20.2.2 stress.abiotic.cold Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. RARE COLD INDUCIBLE GENE 3 (RCI3)


Gene families : OG_01_0000661 (Gene family) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d024751
Cluster HCCA cluster: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031311001 No alias 26.12 misc.peroxidases Encodes a cold-inducible cationic... 0.02 Gene family
LOC_Os03g02920 Os03g0121200 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.04 Gene family
MA_10433564g0020 No alias 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.03 Gene family
MA_651584g0010 No alias 26.12 misc.peroxidases Peroxidase superfamily protein 0.02 Gene family
MA_87008g0010 No alias 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.05 Gene family
Zm00001d010925 GRMZM2G043855 26.12 misc.peroxidases Peroxidase superfamily protein 0.03 Gene family
Zm00001d017696 GRMZM2G076562 26.12 misc.peroxidases Peroxidase superfamily protein 0.03 Gene family
Zm00001d024753 GRMZM2G177792 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan
BP GO:0006979 response to oxidative stress IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 46 294
No external refs found!