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  5. AMTR_s00127p00094990

AMTR_s00127p00094990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00127.19

Description : 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum


Gene families : OG0009865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009865_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00127p00094990

Target Alias Description ECC score Gene Family Method Actions
AT2G07725 No alias Ribosomal L5P family protein 0.08 OrthoFinder output from all 47 species
ATMG00210 RPL5 ribosomal protein L5 0.08 OrthoFinder output from all 47 species
Aev_g12839 No alias component *(uL5m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_34381 No alias 60S ribosomal protein L5, mitochondrial OS=Oenothera... 0.03 OrthoFinder output from all 47 species
LOC_Os09g08890.1 LOC_Os09g08890 component mtRPL5 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Lfl_g08344 No alias component *(uL5m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp2g12110.1 No alias component mtRPL5 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Pir_g07842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15215 No alias component *(uL5m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!