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  5. AMTR_s00122p00099920

AMTR_s00122p00099920 (YUC4,...)


Aliases : YUC4, evm_27.TU.AmTr_v1.0_scaffold00122.41

Description : Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.YUCCA-type flavin monooxygenase


Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00099920
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene30495.t1 YUC5, SUPER1,... flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38026.t1 YUC9, Aspi01Gene38026 flavin-dependent monooxygenase *(YUCCA) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g039040 YUC5, SUPER1 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G116200.1 YUC5, SUPER1,... flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006437 YUC3 flavin-dependent monooxygenase *(YUCCA) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006184 obsolete GTP catabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020946 Flavin_mOase-like 23 342
No external refs found!