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  5. AMTR_s00122p00090120

AMTR_s00122p00090120 (GA4, GA3OX1,...)


Aliases : GA4, GA3OX1, ATGA3OX1, evm_27.TU.AmTr_v1.0_scaffold00122.35

Description : Phytohormones.gibberellin.synthesis.gibberellin 3-oxidase


Gene families : OG0003490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00090120

Target Alias Description ECC score Gene Family Method Actions
AT1G80340 ATGA3OX2, GA3OX2, GA4H gibberellin 3-oxidase 2 0.04 OrthoFinder output from all 47 species
Adi_g086645 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
Adi_g086646 FLS1, ATFLS1, FLS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10484 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Als_g21887 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Dac_g46419 ATGA3OX3, GA3OX3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25652 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01017178001 GA4, GA3OX1, ATGA3OX1 Phytohormones.gibberellin.synthesis.gibberellin 3-oxidase 0.04 OrthoFinder output from all 47 species
Len_g13009 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Len_g38135 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.06 OrthoFinder output from all 47 species
Ore_g04786 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Sam_g37551 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Solyc03g119910.4.1 ATGA3OX2,... gibberellin 3-oxidase 0.03 OrthoFinder output from all 47 species
Spa_g41577 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Zm00001e016719_P001 GA4, GA3OX1,... gibberellin 3-oxidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 199 296
IPR026992 DIOX_N 47 150
No external refs found!