AMTR_s00122p00082000 (AAA1, LUE1, FTR,...)

Aliases : AAA1, LUE1, FTR, ATKTN1, FRC2, FRA2, ERH3, KTN1, BOT1, evm_27.TU.AmTr_v1.0_scaffold00122.30

Description : Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.catalytic component

Gene families : OG0004844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004844_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00122p00082000

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022736	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Aob_g08392	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Dcu_g09863	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Dcu_g24052	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
LOC_Os01g49000.1	AAA1, LUE1, FTR,...	catalytic component of Katanin ATP-dependent microtubule...	0.05	OrthoFinder output from all 47 species
Lfl_g04108	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Msp_g03183	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Sam_g29611	No alias	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Solyc06g066810.3.1	AAA1, LUE1, FTR,...	catalytic component of Katanin ATP-dependent microtubule...	0.03	OrthoFinder output from all 47 species
Zm00001e020144_P001	AAA1, LUE1, FTR,...	catalytic component of Katanin ATP-dependent microtubule...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004143	diacylglycerol kinase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015415	Vps4_C	477	522
IPR003959	ATPase_AAA_core	276	413

External Links

No external refs found!