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  5. AMTR_s00119p00135380

AMTR_s00119p00135380 (TCP10,...)


Aliases : TCP10, evm_27.TU.AmTr_v1.0_scaffold00119.112

Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00135380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00357p00009370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.04 OrthoFinder output from all 47 species
Aev_g15116 TCP2 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28173 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_52440g0010 TCP4, MEE35 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_547683g0010 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.07 OrthoFinder output from all 47 species
Nbi_g10533 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20245 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005333 Transcription_factor_TCP 109 197
No external refs found!