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  5. AMTR_s00119p00124540

AMTR_s00119p00124540 (TOM40,...)


Aliases : TOM40, evm_27.TU.AmTr_v1.0_scaffold00119.97

Description : Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component


Gene families : OG0002328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00124540

Target Alias Description ECC score Gene Family Method Actions
AT3G20000 TOM40 translocase of the outer mitochondrial membrane 40 0.03 OrthoFinder output from all 47 species
Adi_g022168 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Ala_g01261 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Als_g52081 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Aop_g01186 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Aop_g32727 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g042988 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Dac_g04134 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Dac_g36688 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Dcu_g06252 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Ehy_g09714 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
LOC_Os01g16910.1 TOM40, LOC_Os01g16910 component Tom40 of outer mitochondrion membrane TOM... 0.03 OrthoFinder output from all 47 species
Lfl_g28612 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
MA_17884g0010 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.01 OrthoFinder output from all 47 species
MA_27666g0010 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.02 OrthoFinder output from all 47 species
Nbi_g00868 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Pir_g07563 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010026 TOM40 regulatory component *(MICU) of MCU calcium uniporter... 0.03 OrthoFinder output from all 47 species
Sam_g07859 No alias channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Solyc06g007710.4.1 TOM40, Solyc06g007710 component Tom40 of outer mitochondrion membrane TOM... 0.04 OrthoFinder output from all 47 species
Solyc06g082793.1.1 TOM40, Solyc06g082793 component Tom40 of outer mitochondrion membrane TOM... 0.02 OrthoFinder output from all 47 species
Spa_g29708 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Spa_g48614 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Spa_g54862 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Tin_g02612 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Zm00001e025489_P003 TOM40, Zm00001e025489 component Tom40 of outer mitochondrion membrane TOM... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 47 318
No external refs found!