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  5. AMTR_s00119p00120480

AMTR_s00119p00120480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.93

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00120480
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
Adi_g116254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29219.t1 Aspi01Gene29219 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50807.t1 Aspi01Gene50807 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55567.t1 Aspi01Gene55567 arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010617 No alias not classified & original description: CDS=72-464 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012021 No alias not classified & original description: CDS=95-559 0.03 OrthoFinder output from all 47 species
Azfi_s0204.g057707 No alias not classified & original description: CDS=495-1133 0.03 OrthoFinder output from all 47 species
Azfi_s0803.g087563 No alias arabinogalactan protein *(Xylogen) & original... 0.02 OrthoFinder output from all 47 species
Cba_g01588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.03 OrthoFinder output from all 47 species
Ceric.01G102400.1 Ceric.01G102400 not classified & original description: pacid=50593041... 0.03 OrthoFinder output from all 47 species
Ceric.05G095500.1 Ceric.05G095500 not classified & original description: pacid=50577222... 0.04 OrthoFinder output from all 47 species
Ceric.09G058500.1 Ceric.09G058500 not classified & original description: pacid=50586776... 0.03 OrthoFinder output from all 47 species
Ceric.12G092600.1 Ceric.12G092600 not classified & original description: pacid=50601501... 0.03 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.05 OrthoFinder output from all 47 species
Ceric.33G062100.1 Ceric.33G062100 not classified & original description: pacid=50607508... 0.03 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.02 OrthoFinder output from all 47 species
Dac_g08118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15255 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09538 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
Gb_02441 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Gb_06123 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g09230.1 LOC_Os03g09230 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
LOC_Os03g20760.1 LOC_Os03g20760 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g57980.1 LOC_Os03g57980 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g43290.1 LOC_Os07g43290 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g06139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10069449g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_113140g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_133359g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_26320g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6825896g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g22240.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Nbi_g04557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27615 No alias arabinogalactan protein *(Xylogen) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g44354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28932 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17108 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23276 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31007 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31936 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49765 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19919 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_3790V3.1 Pp3c14_3790 Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
Ppi_g11193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014611 No alias arabinogalactan protein *(Xylogen) & original... 0.05 OrthoFinder output from all 47 species
Sam_g02332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g105010.3.1 Solyc01g105010 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc06g054060.1.1 Solyc06g054060 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc06g069110.4.1 Solyc06g069110 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc06g073660.3.1 Solyc06g073660 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g065410.4.1 Solyc09g065410 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g082270.4.1 Solyc09g082270 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e005336_P001 Zm00001e005336 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e006054_P001 Zm00001e006054 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e010812_P001 Zm00001e010812 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011463_P001 Zm00001e011463 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011883_P002 Zm00001e011883 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e022825_P001 Zm00001e022825 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030289_P001 Zm00001e030289 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 15 112
No external refs found!