AMTR_s00119p00070320 (CDC45,...)

Aliases : CDC45, evm_27.TU.AmTr_v1.0_scaffold00119.49

Description : Cell cycle.interphase.DNA replication.initiation.CDC45 auxiliary factor

Gene families : OG0008920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008920_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00119p00070320

Target	Alias	Description	ECC score	Gene Family Method
AT3G25100	CDC45	cell division cycle 45	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001302.6	No alias	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.01	OrthoFinder output from all 47 species
Cre06.g270250	No alias	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.01	OrthoFinder output from all 47 species
GSVIVT01000797001	CDC45	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.03	OrthoFinder output from all 47 species
Gb_40696	CDC45	CDC45 cell cycle auxiliary factor	0.02	OrthoFinder output from all 47 species
Msp_g11586	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g00437	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003874	CDC45	123	549
IPR003874	CDC45	31	100

External Links

No external refs found!