AMTR_s00119p00054040 (ORC5, ATORC5,...)

Aliases : ORC5, ATORC5, evm_27.TU.AmTr_v1.0_scaffold00119.33

Description : Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC5 component

Gene families : OG0007814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007814_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00119p00054040

Target	Alias	Description	ECC score	Gene Family Method
Aop_g04522	ORC5, ATORC5	component *(ORC5) of origin recognition complex &...	0.07	OrthoFinder output from all 47 species
Ceric.01G111600.1	ORC5, ATORC5,...	component *(ORC5) of origin recognition complex &...	0.11	OrthoFinder output from all 47 species
GSVIVT01008477001	ORC5, ATORC5	Cell cycle.interphase.DNA...	0.12	OrthoFinder output from all 47 species
MA_10436793g0010	ORC5, ATORC5	component ORC5 of origin recognition complex	0.11	OrthoFinder output from all 47 species
Mp2g18290.1	ORC5, ATORC5	component ORC5 of origin recognition complex	0.13	OrthoFinder output from all 47 species
Ppi_g28813	ORC5, ATORC5	component *(ORC5) of origin recognition complex &...	0.02	OrthoFinder output from all 47 species
Solyc01g094760.3.1	ORC5, ATORC5,...	component ORC5 of origin recognition complex	0.06	OrthoFinder output from all 47 species
Tin_g03359	ORC5, ATORC5	component *(ORC5) of origin recognition complex &...	0.12	OrthoFinder output from all 47 species
Zm00001e012004_P001	ORC5, ATORC5,...	component ORC5 of origin recognition complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011579	ATPase_dom	74	243

External Links

No external refs found!