Zm00001d024672 (GRMZM2G304010)


Aliases : GRMZM2G304010

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a U-box/ARM repeat protein required fore self-incompatibility. plant U-box 8 (PUB8)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d024672
Cluster HCCA cluster: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT2G35930 PUB23 plant U-box 23 0.04 Gene family
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.03 Gene family
GSVIVT01011139001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01011140001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os04g34140 Os04g0418500 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os08g04470 Os08g0139400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
LOC_Os12g06410 Os12g0161100 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_10430196g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_10432981g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_126399g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
MA_684442g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.06 Gene family
MA_8837995g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
MA_95662g0020 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
Smo172230 PACid_15410363 No description available 0.02 Gene family
Smo92304 PACid_15417565 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc01g007010.3.1 Solyc01g007010.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g007040.3.1 Solyc01g007040.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g107980.3.1 Solyc01g107980.3 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
Solyc04g071030.1.1 Solyc04g071030.1 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.01 Gene family
Solyc06g074140.1.1 Solyc06g074140.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc11g068940.1.1 Solyc11g068940.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d001769 GRMZM2G013776 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d003624 GRMZM2G361100 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 5 69
No external refs found!