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  5. AMTR_s00118p00107060

AMTR_s00118p00107060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00118.21

Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.RMR vacuolar sorting receptor


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00118p00107060

Target Alias Description ECC score Gene Family Method Actions
AT5G66160 RMR1, ATRMR1 receptor homology region transmembrane domain ring H2... 0.03 OrthoFinder output from all 47 species
Aev_g04642 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Ehy_g06728 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Tin_g23884 No alias storage vacuole protein sorTing receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Zm00001e040628_P001 Zm00001e040628 vacuolar sorting receptor (RMR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 65 153
IPR001841 Znf_RING 243 287
No external refs found!