AMTR_s00117p00072000 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00117.19

Description : Lipid metabolism.fatty acid synthesis.fatty acid chain termination.oleoyl-ACP thioesterase

Gene families : OG0000593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00117p00072000
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
AT1G08510	FATB	fatty acyl-ACP thioesterases B	0.02	OrthoFinder output from all 47 species
AT3G25110	FaTA, AtFaTA	fatA acyl-ACP thioesterase	0.04	OrthoFinder output from all 47 species
AT4G13050	No alias	Acyl-ACP thioesterase	0.04	OrthoFinder output from all 47 species
Aspi01Gene28768.t1	FaTA, AtFaTA,...	oleoyl-ACP thioesterase *(FATA) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016103	No alias	oleoyl-ACP thioesterase *(FATA) & original description: CDS=1-945	0.02	OrthoFinder output from all 47 species
Cba_g12319	FATB	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g27295	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g39347	FATB	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16375	FATB	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01004951001	FaTA, AtFaTA	Lipid metabolism.fatty acid synthesis.fatty acid chain...	0.07	OrthoFinder output from all 47 species
LOC_Os09g32760.1	FaTA, AtFaTA,...	oleoyl-ACP thioesterase	0.07	OrthoFinder output from all 47 species
MA_338g0010	FaTA, AtFaTA	Oleoyl-acyl carrier protein thioesterase 1,...	0.02	OrthoFinder output from all 47 species
Ore_g43997	FATB	palmitoyl-ACP thioesterase *(FatM) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g083380.3.1	Solyc06g083380	oleoyl-ACP thioesterase	0.07	OrthoFinder output from all 47 species
Zm00001e010117_P001	FaTA, AtFaTA,...	oleoyl-ACP thioesterase	0.05	OrthoFinder output from all 47 species
Zm00001e036534_P002	FATB, Zm00001e036534	palmitoyl-ACP thioesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016790	thiolester hydrolase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003864	3-methyl-2-oxobutanoate hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0003913	DNA photolyase activity	IEP	HCCA
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0015939	pantothenate metabolic process	IEP	HCCA
BP	GO:0015940	pantothenate biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002864	Acyl-ACP_thioesterase	81	370

External Links

No external refs found!

AMTR_s00117p00072000 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation