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  5. AMTR_s00117p00036240

AMTR_s00117p00036240 (TUBG1,...)


Aliases : TUBG1, evm_27.TU.AmTr_v1.0_scaffold00117.8

Description : Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).TUG1 gamma tubulin component


Gene families : OG0003561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00117p00036240
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g017250 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Aob_g04347 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017622 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Spa_g18001 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Tin_g00984 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006184 obsolete GTP catabolic process IEA Interproscan
BP GO:0051258 protein polymerization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009432 SOS response IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 264 394
IPR003008 Tubulin_FtsZ_GTPase 4 226
No external refs found!