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  5. AMTR_s00116p00138800

AMTR_s00116p00138800 (POB1, ATPOB1,...)


Aliases : POB1, ATPOB1, evm_27.TU.AmTr_v1.0_scaffold00116.41

Description : BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana


Gene families : OG0001144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00116p00138800
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00116p00144040 POB1, ATPOB1,... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
AMTR_s00116p00144700 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01012555001 POB1, ATPOB1 BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027032001 POB1, ATPOB1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011705 BACK 16 59
No external refs found!