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  5. AMTR_s00115p00126760

AMTR_s00115p00126760 (HUA1,...)


Aliases : HUA1, evm_27.TU.AmTr_v1.0_scaffold00115.20

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00115p00126760

Target Alias Description ECC score Gene Family Method Actions
Adi_g060210 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aev_g08293 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ala_g14650 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036245 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016300.1 HUA1, Ceric.30G016300 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Dcu_g11355 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42970.1 HUA1, LOC_Os01g42970 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g30979 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
MA_8911g0010 HUA1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g10720 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018722 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g13535 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g39859 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Solyc12g017410.2.1 HUA1, Solyc12g017410 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 353 377
IPR000571 Znf_CCCH 434 455
IPR000571 Znf_CCCH 486 511
IPR000571 Znf_CCCH 219 245
IPR000571 Znf_CCCH 168 193
IPR000571 Znf_CCCH 274 298
No external refs found!