AMTR_s00114p00031980 (ABI5, GIA1,...)


Aliases : ABI5, GIA1, evm_27.TU.AmTr_v1.0_scaffold00114.10

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00114p00031980
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT2G17770 ATBZIP27, BZIP27, FDP basic region/leucine zipper motif 27 0.03 OrthoFinder output from all 47 species
Adi_g008679 ABF1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099310 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12373 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61507 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01753.t1 ABF1, Aspi01Gene01753 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21976 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G009600.1 ABF2, ATAREB1,... bZIP class-A transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g03182 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08207 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02975 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006332001 FD-1, FD, atbzip14 Protein FD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16168 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59760.1 DPBF3, AREB3,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64730.1 GBF4, LOC_Os01g64730 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g20650.1 DPBF4, ATBZIP12,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g43600.1 FD-1, FD,... transcription factor (bZIP) 0.05 OrthoFinder output from all 47 species
LOC_Os09g36910.1 ATBZIP27,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
MA_28402g0010 DPBF4, ATBZIP12, EEL transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Mp2g23600.1 ABF1 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Ore_g11141 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18050 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12947 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33304 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54727 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000226 DPBF3, AREB3 bZIP class-A transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019760 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo444199 DPBF2, AtbZIP67 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
Solyc02g061990.3.1 ATBZIP27,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g083520.2.1 ATBZIP27,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e015956_P002 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e019163_P004 GBF4, Zm00001e019163 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e019209_P001 ABF1, Zm00001e019209 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e019490_P001 DPBF3, AREB3,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e028693_P002 ABI5, GIA1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 302 356
No external refs found!