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  5. AMTR_s00113p00026730

AMTR_s00113p00026730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00113.6

No description available


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00113p00026730
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00035620 evm_27.TU.AmTr_v1... Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
AT1G66480 No alias plastid movement impaired 2 0.04 OrthoFinder output from all 47 species
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
AT5G37840 No alias BEST Arabidopsis thaliana protein match is: plastid... 0.04 OrthoFinder output from all 47 species
Aev_g12298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57399.t1 Aspi01Gene57399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G010100.1 Ceric.37G010100 not classified & original description: pacid=50615888... 0.03 OrthoFinder output from all 47 species
Dcu_g09790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008403001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011766001 At17.1 Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01019671001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01027432001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01030865001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_25912 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_33935 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33937 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_33939 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39026 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_39534 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_39648 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_40213 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g49960.1 LOC_Os02g49960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g14780.1 LOC_Os06g14780 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g33210.1 LOC_Os08g33210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os09g23780.1 LOC_Os09g23780 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g25690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431168g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436027g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10882g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_140980g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_16509g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_20252g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_208513g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_248791g0010 At17.1 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_2723686g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_356354g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_394398g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_536291g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6869016g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_91700g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_953514g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g09889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g008210.4.1 At17.1, Solyc05g008210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc05g008220.4.1 At17.1, Solyc05g008220 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc10g005020.3.1 Solyc10g005020 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Tin_g07276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004161_P002 Zm00001e004161 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e015734_P001 Zm00001e015734 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e034082_P002 Zm00001e034082 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036745_P001 Zm00001e036745 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 173
No external refs found!