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  5. AMTR_s00111p00136390

AMTR_s00111p00136390 (ATSYP124, SYP124,...)


Aliases : ATSYP124, SYP124, evm_27.TU.AmTr_v1.0_scaffold00111.115

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00136390

Target Alias Description ECC score Gene Family Method Actions
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.09 OrthoFinder output from all 47 species
AT3G11820 SYP121,... syntaxin of plants 121 0.03 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.05 OrthoFinder output from all 47 species
Adi_g004466 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g02843 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g20584 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72617.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cba_g10610 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.22G024200.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.38G033900.1 SYP132,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dcu_g44323 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dde_g18785 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
GSVIVT01006716001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.08 OrthoFinder output from all 47 species
GSVIVT01030578001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.1 OrthoFinder output from all 47 species
LOC_Os02g11890.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
LOC_Os06g07200.1 SYP132,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
LOC_Os06g39050.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.09 OrthoFinder output from all 47 species
MA_28961g0010 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
MA_6119g0010 ATSYP124, SYP124 Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.03 OrthoFinder output from all 47 species
Pir_g16581 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004207 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Solyc10g081850.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Solyc12g005580.2.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Tin_g03937 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Zm00001e005922_P001 SYP121,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Zm00001e030621_P001 ATSYP124,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Zm00001e037387_P002 ATSYP124,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 218 278
IPR006011 Syntaxin_N 43 149
No external refs found!