1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00111p00135880

AMTR_s00111p00135880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.114

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00135880

Target Alias Description ECC score Gene Family Method Actions
Adi_g013787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26275 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene37906.t1 Aspi01Gene37906 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ceric.22G032800.1 Ceric.22G032800 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.06 OrthoFinder output from all 47 species
Dac_g07913 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01014756001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Len_g01087 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Len_g13453 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ore_g40387 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g27107 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Solyc04g005100.3.1 Solyc04g005100 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc06g071230.3.1 Solyc06g071230 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 98 142
No external refs found!