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  5. AMTR_s00111p00131260

AMTR_s00111p00131260 (AtEMF2, EMF2, VEF2,...)


Aliases : AtEMF2, EMF2, VEF2, CYR1, evm_27.TU.AmTr_v1.0_scaffold00111.109

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0003135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00131260
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0031.g024523 AtEMF2, EMF2, VEF2, CYR1 component *(EMF2/VRN2/FIS2) of PRC2 histone methylation... 0.03 OrthoFinder output from all 47 species
Ehy_g31099 AtEMF2, EMF2, VEF2, CYR1 component *(EMF2/VRN2/FIS2) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR019135 Polycomb_protein_VEFS-Box 574 713
No external refs found!