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  5. AMTR_s00111p00027680

AMTR_s00111p00027680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.10

Description : Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00027680

Target Alias Description ECC score Gene Family Method Actions
Adi_g051974 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g056313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06026.t1 Aspi01Gene06026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45350.1 LOC_Os01g45350 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g02775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_24480V3.1 Pp3c6_24480 Exostosin family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013895 No alias xylogalacturonan xylosyltransferase & original... 0.03 OrthoFinder output from all 47 species
Sam_g09405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo106537 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g078450.3.1 Solyc08g078450 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g11975 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008831 dTDP-4-dehydrorhamnose reductase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045226 extracellular polysaccharide biosynthetic process IEP HCCA
BP GO:0046379 extracellular polysaccharide metabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 317 602
No external refs found!