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  5. AMTR_s00111p00023340

AMTR_s00111p00023340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.6

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL15 component


Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00023340

Target Alias Description ECC score Gene Family Method Actions
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.09 OrthoFinder output from all 47 species
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.16 OrthoFinder output from all 47 species
Adi_g011907 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Aev_g46320 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g19522 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ala_g35980 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g45893 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g00218 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Azfi_s0148.g053106 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Cba_g11182 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g11183 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.30G015200.1 Ceric.30G015200 component *(eL15) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Ceric.31G036200.1 Ceric.31G036200 component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Dac_g12320 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Dcu_g06645 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g36045 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder output from all 47 species
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder output from all 47 species
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
Gb_32917 No alias component RPL15 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Gb_36986 No alias component RPL15 of LSU proteome component 0.1 OrthoFinder output from all 47 species
LOC_Os03g40180.1 LOC_Os03g40180 component RPL15 of LSU proteome component 0.14 OrthoFinder output from all 47 species
LOC_Os05g19370.1 LOC_Os05g19370 component RPL15 of LSU proteome component 0.15 OrthoFinder output from all 47 species
Lfl_g00902 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g29958 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
MA_19619g0010 No alias component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_29804g0010 No alias component RPL15 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.16 OrthoFinder output from all 47 species
Msp_g17670 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g01701 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Pir_g30101 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c17_22180V3.1 Pp3c17_22180 Ribosomal protein L23/L15e family protein 0.06 OrthoFinder output from all 47 species
Ppi_g43751 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016249 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g13183 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g13184 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g14846 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g36073 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g36074 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g42941 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo270259 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder output from all 47 species
Solyc04g008460.4.1 Solyc04g008460 component RPL15 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Solyc06g060400.3.1 Solyc06g060400 component RPL15 of LSU proteome component 0.21 OrthoFinder output from all 47 species
Solyc06g064630.3.1 Solyc06g064630 component RPL15 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Spa_g26060 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g26061 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Spa_g39098 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Spa_g55931 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Tin_g30457 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Zm00001e010380_P001 Zm00001e010380 component RPL15 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Zm00001e032897_P001 Zm00001e032897 component RPL15 of LSU proteome component 0.13 OrthoFinder output from all 47 species
Zm00001e034995_P001 Zm00001e034995 component RPL15 of LSU proteome component 0.16 OrthoFinder output from all 47 species
Zm00001e034996_P001 Zm00001e034996 component RPL15 of LSU proteome component 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 31 222
No external refs found!