1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00110p00115240

AMTR_s00110p00115240


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00115240

Target Alias Description ECC score Gene Family Method Actions
AT1G63740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
Adi_g019390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45502.t1 Aspi01Gene45502 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09197 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10430493g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Mp5g23300.1 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pir_g29887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49152 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g011090.1.1 Solyc11g011090 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 3 127
IPR001611 Leu-rich_rpt 659 681
IPR001611 Leu-rich_rpt 612 630
IPR001611 Leu-rich_rpt 778 800
IPR002182 NB-ARC 177 449
IPR025875 Leu-rich_rpt_4 729 776
No external refs found!