1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00110p00085760

AMTR_s00110p00085760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.46

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00085760

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00120810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT2G17180 No alias C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT2G45120 No alias C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT5G61470 No alias C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
Azfi_s0222.g058812 AZF1, ZF1 C2H2-type subclass ZAT transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g36786 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_40148 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g60560.1 LOC_Os03g60560 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os07g40080.1 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc05g050860.2.1 Solyc05g050860 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc05g055500.1.1 Solyc05g055500 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e023551_P001 Zm00001e023551 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!