1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00110p00073440

AMTR_s00110p00073440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.38

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase


Gene families : OG0001365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001365_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00073440

Target Alias Description ECC score Gene Family Method Actions
Adi_g085855 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aev_g10155 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Als_g04335 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aop_g05954 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014860 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.13G076300.1 Ceric.13G076300 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.24G021700.1 Ceric.24G021700 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.35G070200.1 Ceric.35G070200 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dcu_g07552 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Dcu_g08134 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g02230 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g11542 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Gb_18539 No alias UDP-D-glucose 6-dehydrogenase 0.03 OrthoFinder output from all 47 species
Gb_30623 No alias UDP-D-glucose 6-dehydrogenase 0.04 OrthoFinder output from all 47 species
LOC_Os03g55070.1 LOC_Os03g55070 UDP-D-glucose 6-dehydrogenase 0.04 OrthoFinder output from all 47 species
LOC_Os12g25690.1 LOC_Os12g25690 UDP-D-glucose 6-dehydrogenase 0.03 OrthoFinder output from all 47 species
Len_g08431 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Msp_g03508 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Nbi_g14159 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Pir_g24849 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ppi_g16167 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ppi_g16958 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g19238 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc02g088690.4.1 Solyc02g088690 UDP-D-glucose 6-dehydrogenase 0.08 OrthoFinder output from all 47 species
Spa_g10887 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Spa_g56759 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Tin_g27368 No alias EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR014027 UDP-Glc/GDP-Man_DH_C 328 451
IPR001732 UDP-Glc/GDP-Man_DH_N 3 186
IPR014026 UDP-Glc/GDP-Man_DH_dimer 209 306
No external refs found!