AMTR_s00109p00125940

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00109p00125940
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00089620	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.03	OrthoFinder output from all 47 species
AT1G63740	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G44400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G44630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G44670	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT4G16920	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G41750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G46470	RPS6	disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G46510	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Adi_g055906	No alias	effector receptor *(NLR) & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g57554	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01038755001	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.02	OrthoFinder output from all 47 species
Gb_08632	No alias	effector receptor (NLR)	0.01	OrthoFinder output from all 47 species
MA_103789g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_10427131g0020	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_10427791g0010	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
MA_10433003g0010	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
MA_10434300g0010	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.02	OrthoFinder output from all 47 species
MA_10435728g0010	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_115479g0020	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
MA_36568g0010	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
MA_9161563g0010	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
Pir_g34544	No alias	effector receptor *(NLR) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g48708	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c26_15380V3.1	Pp3c26_15380	disease resistance protein (TIR-NBS-LRR class), putative	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000228	nuclear chromosome	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	678	700
IPR000157	TIR_dom	3	127
IPR002182	NB-ARC	291	470
IPR025875	Leu-rich_rpt_4	606	643

External Links

No external refs found!

AMTR_s00109p00125940

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation