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Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.112
Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00109p00114170 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G61660 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G20100 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G20640 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G05170 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05285 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06030 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene71895.t1 | Aspi01Gene71895 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0247.g060091 | No alias | bHLH-type transcription factor & original description: CDS=1-450 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.32G034500.1 | Ceric.32G034500 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09942 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g14173 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26124 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015353001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01038142001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g13000.1 | LOC_Os01g13000 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g17680.1 | LOC_Os02g17680 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g47810.1 | LOC_Os04g47810 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15621 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g31190 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33970 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18964 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g09411 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18174 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g079760.3.1 | Solyc02g079760 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g080710.4.1 | Solyc04g080710 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g020960.3.1 | Solyc07g020960 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc07g063830.3.1 | Solyc07g063830 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g006640.3.1 | Solyc10g006640 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15320 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g41831 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010350_P001 | Zm00001e010350 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016395_P001 | Zm00001e016395 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034854_P002 | Zm00001e034854 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0008219 | cell death | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |