1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00109p00063250

AMTR_s00109p00063250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.48

Description : Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00063250

Target Alias Description ECC score Gene Family Method Actions
Aev_g18948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14315 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430317g0040 No alias Pentatricopeptide repeat-containing protein At4g11690... 0.03 OrthoFinder output from all 47 species
Ore_g30153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 113 162
No external refs found!