1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00109p00027450

AMTR_s00109p00027450 (IQD6,...)


Aliases : IQD6, evm_27.TU.AmTr_v1.0_scaffold00109.12

Description : Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana


Gene families : OG0001294 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00027450
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G17480 IQD7 IQ-domain 7 0.05 OrthoFinder output from all 47 species
AT1G72670 iqd8 IQ-domain 8 0.13 OrthoFinder output from all 47 species
AT2G26180 IQD6 IQ-domain 6 0.02 OrthoFinder output from all 47 species
AT3G15050 IQD10 IQ-domain 10 0.04 OrthoFinder output from all 47 species
AT3G22190 IQD5 IQ-domain 5 0.02 OrthoFinder output from all 47 species
Ala_g23155 IQD6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11971 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g18384 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00647 IQD6 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene15912.t1 IQD6, Aspi01Gene15912 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023688 IQD6 not classified & original description: CDS=350-1708 0.04 OrthoFinder output from all 47 species
Ceric.01G063900.1 IQD5, Ceric.01G063900 not classified & original description: pacid=50591549... 0.01 OrthoFinder output from all 47 species
Ceric.09G101400.1 IQD6, Ceric.09G101400 not classified & original description: pacid=50587571... 0.06 OrthoFinder output from all 47 species
Ceric.18G013400.1 IQD6, Ceric.18G013400 not classified & original description: pacid=50621782... 0.03 OrthoFinder output from all 47 species
Dac_g00730 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45600 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31746 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42596 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014238001 IQD10 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035382001 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Gb_01817 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species
LOC_Os01g09790.1 IQD6, LOC_Os01g09790 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g51230.1 IQD6, LOC_Os01g51230 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g06160.2 iqd9, LOC_Os06g06160 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g04277 IQD6 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g13932 IQD6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32341 IQD6 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g24119 IQD6 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Pir_g50153 iqd8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02071 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14460 IQD6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021834 IQD6 not classified & original description: CDS=1-1233 0.04 OrthoFinder output from all 47 species
Sam_g25102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g121760.3.1 iqd8, Solyc03g121760 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc08g062940.4.1 IQD6, Solyc08g062940 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Spa_g50617 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05096 IQD6 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g06466 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016563_P001 IQD6, Zm00001e016563 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e020006_P001 IQD6, Zm00001e020006 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e032277_P001 IQD6, Zm00001e032277 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036466_P001 iqd9, Zm00001e036466 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 86 105
No external refs found!