AMTR_s00108p00034740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00108.5

No description available


Gene families : OG0007796 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007796_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00108p00034740

Target Alias Description ECC score Gene Family Method Actions
Aob_g01202 No alias RsmG-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27454 No alias RsmG-type rRNA methyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25868 No alias RsmG-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06948 No alias RsmG-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g113860.2.1 Solyc03g113860 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008649 rRNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003682 rRNA_ssu_MeTfrase_G 60 246
No external refs found!