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  5. AMTR_s00107p00150560

AMTR_s00107p00150560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00107.45

No description available


Gene families : OG0007290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00107p00150560

Target Alias Description ECC score Gene Family Method Actions
AT1G35420 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g039753 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g01237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08821 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene00297.t1 Aspi01Gene00297 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00297.t2 Aspi01Gene00297 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03758.t1 Aspi01Gene03758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07427 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01026084001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_13385 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g35470.1 LOC_Os05g35470 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g56011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427595g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g16219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49041 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g07636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027005_P005 Zm00001e027005 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002925 Dienelactn_hydro 113 324
No external refs found!