1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00106p00152160

AMTR_s00106p00152160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.127

Description : Probable aquaporin TIP2-2 OS=Arabidopsis thaliana


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00152160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00231200 TMP-C, PIP1;4,... Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
Aev_g00885 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Als_g41241 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Aob_g04788 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06973 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32474 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Cba_g22248 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021012001 TMP-C, PIP1;4, PIP1E Probable aquaporin PIP1-4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os02g57720.1 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g05290.1 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g22960.1 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Len_g21358 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Mp4g04470.1 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Msp_g33788 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g61984 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Tin_g22334 ATTIP2;1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009536_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Zm00001e016801_P001 TIP4;1, Zm00001e016801 tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000425 MIP 1 88
No external refs found!