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  5. AMTR_s00106p00017820

AMTR_s00106p00017820 (CPL4,...)


Aliases : CPL4, evm_27.TU.AmTr_v1.0_scaffold00106.4

Description : Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster H/CPL phosphatase


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00106p00017820

Target Alias Description ECC score Gene Family Method Actions
Cre02.g102950 CPL4 Protein modification.dephosphorylation.aspartate-based... 0.02 OrthoFinder output from all 47 species
Dde_g12844 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g32430.1 CPL4, LOC_Os05g32430 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000884 CPL4 subcluster H/CPL3-4 phosphatase & original description:... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 405 460
IPR004274 FCP1_dom 169 340
No external refs found!