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  5. AMTR_s00104p00148010

AMTR_s00104p00148010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00104.73

No description available


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00104p00148010

Target Alias Description ECC score Gene Family Method Actions
Adi_g024366 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06105 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56138 ADC1, ARGDC, ARGDC1, SPE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15163.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g01690.3 ADC1, ARGDC,... arginine decarboxylase 0.01 OrthoFinder output from all 47 species
LOC_Os06g04070.1 ADC2, SPE2,... arginine decarboxylase 0.03 OrthoFinder output from all 47 species
Msp_g38762 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01284 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06691 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!