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  5. AMTR_s00104p00136740

AMTR_s00104p00136740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00104.66

Description : DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana


Gene families : OG0002081 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002081_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00104p00136740

Target Alias Description ECC score Gene Family Method Actions
AT3G58510 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
Ala_g21332 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.02 OrthoFinder output from all 47 species
Azfi_s0333.g065464 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.04 OrthoFinder output from all 47 species
Ceric.08G007800.1 Ceric.08G007800 sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.04 OrthoFinder output from all 47 species
Gb_15078 No alias DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os07g10250.1 LOC_Os07g10250 DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os11g38670.1 LOC_Os11g38670 DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_137324g0010 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_181586g0010 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Ore_g30360 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.04 OrthoFinder output from all 47 species
Ore_g43213 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.02 OrthoFinder output from all 47 species
Pir_g08966 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 OrthoFinder output from all 47 species
Sam_g15279 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.04 OrthoFinder output from all 47 species
Smo267628 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc03g052980.3.1 Solyc03g052980 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011397_P001 Zm00001e011397 DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 451 526
IPR011545 DEAD/DEAH_box_helicase_dom 196 376
No external refs found!