Zm00001d024523 (GRMZM2G042992)

Aliases : GRMZM2G042992

Description : 33.99 development.unspecified Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. TOPLESS (TPL)

Gene families : OG_01_0000380 (Gene family) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d024523
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015571001 No alias 33.99 development.unspecified WUS-interacting protein 2 (WSIP2) 0.02 Gene family
LOC_Os03g14980 Os03g0254700 33.99 development.unspecified TOPLESS-related 1 (TPR1) 0.02 Gene family
LOC_Os08g06480 Os08g0162100 33.99 development.unspecified TOPLESS-related 1 (TPR1) 0.03 Gene family
MA_10429317g0020 No alias 33.99 development.unspecified TOPLESS-related 2 (TPR2) 0.03 Gene family
MA_16979g0010 No alias 33.99 development.unspecified Encodes a protein with... 0.02 Gene family
Solyc08g076030.3.1 Solyc08g076030.3 33.99 development.unspecified Encodes a protein with... 0.03 Gene family
Zm00001d040279 GRMZM2G316967 33.99 development.unspecified TOPLESS-related 2 (TPR2) 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 917 950
IPR001680 WD40_repeat 445 482
No external refs found!