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  5. AMTR_s00103p00148260

AMTR_s00103p00148260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.106

Description : Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00148260

Target Alias Description ECC score Gene Family Method Actions
Adi_g006702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14580.t1 Aspi01Gene14580 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G006900.1 Ceric.34G006900 not classified & original description: pacid=50624161... 0.03 OrthoFinder output from all 47 species
Dac_g14982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033307001 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g30438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_138810g0010 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Sam_g19777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo180460 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc03g058190.3.1 Solyc03g058190 Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 303 373
IPR000795 T_Tr_GTP-bd_dom 88 279
IPR000640 EFG_V-like 480 566
No external refs found!