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  5. AMTR_s00103p00146150

AMTR_s00103p00146150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.104

Description : Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase


Gene families : OG0000622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00146150

Target Alias Description ECC score Gene Family Method Actions
AT3G53450 No alias Putative lysine decarboxylase family protein 0.03 OrthoFinder output from all 47 species
AT5G11950 No alias Putative lysine decarboxylase family protein 0.02 OrthoFinder output from all 47 species
Ala_g03118 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Als_g00402 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Als_g05333 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Cba_g06909 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G035200.1 Ceric.11G035200 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Ceric.11G045200.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01023920001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
GSVIVT01033934001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Gb_18238 No alias Cytokinin riboside 5-monophosphate phosphoribohydrolase... 0.03 OrthoFinder output from all 47 species
Gb_24266 LOG1, ATLOG1 cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
LOC_Os04g43840.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
LOC_Os09g37540.1 LOC_Os09g37540 cytokinin phosphoribohydrolase 0.02 OrthoFinder output from all 47 species
Len_g03157 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g00449 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Ore_g00799 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g075090.4.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Solyc10g084150.2.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.05 OrthoFinder output from all 47 species
Spa_g01666 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005344_P001 Zm00001e005344 cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
Zm00001e012673_P001 Zm00001e012673 cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR005269 LOG 41 146
No external refs found!