1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00103p00136100

AMTR_s00103p00136100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.88

No description available


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00136100

Target Alias Description ECC score Gene Family Method Actions
Adi_g014575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008886 No alias not classified & original description: CDS=46-1419 0.03 OrthoFinder output from all 47 species
Ceric.23G036900.1 Ceric.23G036900 not classified & original description: pacid=50610458... 0.02 OrthoFinder output from all 47 species
Cre17.g741850 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g05608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22631 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g27629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!