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Aliases : ATAB2, evm_27.TU.AmTr_v1.0_scaffold00103.69
Description : Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0004008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004008_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G08010 | ATAB2 | RNA binding | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g014503 | ATAB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g09787 | ATAB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g04128 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g04239 | ATAB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02871 | ATAB2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g31544 | ATAB2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0050.g031031 | ATAB2 | not classified & original description: CDS=196-1422 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03154 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G068300.1 | ATAB2, Ceric.21G068300 | not classified & original description: pacid=50604093... | 0.06 | OrthoFinder output from all 47 species | |
| Cre17.g702500 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11792 | ATAB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14997 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g18747 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04344 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05805 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032129001 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
| Gb_34984 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34986 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g39740.1 | ATAB2, LOC_Os02g39740 | Protein TAB2 homolog, chloroplastic OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18822 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g30744 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430622g0010 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Zea mays... | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g14850.1 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g02016 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00688 | ATAB2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g01898 | ATAB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g05869 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02783 | ATAB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g10236 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03703 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32398 | ATAB2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015277 | ATAB2 | not classified & original description: CDS=173-1390 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g10050 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10068 | ATAB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g00858 | ATAB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10787 | ATAB2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e015079_P001 | ATAB2, Zm00001e015079 | Protein TAB2 homolog, chloroplastic OS=Zea mays... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004659 | prenyltransferase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016987 | sigma factor activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009472 | Tab2-like | 86 | 360 |
| No external refs found! |